Daniel Crowley
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Select Publications
Journal of Animal Ecology
2025
Cohorts of immature Pteropus bats show interannual variation in Hendra virus serology
How is Hendra virus maintaining transmission?
PLOS Biology
2024
Bats generate lower affinity but higher diversity antibody responses than those of mice, but pathogen-binding capacity increases if protein is restricted in their diet
Experimental infection models reveal surprising patterns in how bats make their antibodies.
Vaccines
2020
Identifying Suspect Bat Reservoirs of Emerging Infections
Analyses of phylogenies help us look for where Ebola virus and henipaviruses may be hiding.
Nature Reviews Microbiology
2022
Ecology, evolution and spillover of coronaviruses from bats
A wealth of information on coronavirus spillover events.
Proceedings of the Royal Society B
2025
Diet-induced changes in metabolism influence immune response and viral shedding in Jamaican fruit bats
A high fat diet leads to more viral shedding.
PLOS Neglected Tropical Diseases
2019
Prioritizing surveillance of Nipah virus in India
After a surprising spillover event in India, we help prioritize future surveillance steps.
Additional Publications
Nature Communications
2025
Synchronized seasonal excretion of multiple coronaviruses coincides with high rates of coinfection in immature bats
Peel AJ, Ruiz-Aravena M, Kim K, Scherting B, Falvo CA,
Crowley DE
, et al.
Nature Communications
2025
Jamaican fruit bats' competence for Ebola but not Marburg virus is driven by intrinsic differences
van Tol S, Port JR, Fischer RJ, Gallogly S, Bushmaker T, Griffin A, …
Crowley DE
, et al.
Emerging Infectious Diseases
2025
Borrelia lineages adjacent to zoonotic clades in black flying foxes (Pteropus alecto), Australia, 2018–2020
Verrett TB, Falvo CA, Benson E, Jones-Slobodian DN,
Crowley DE
, et al.
Proceedings of the Royal Society B
2025
Diet composition affects bat viral shedding with potential consequences for pathogen spillover
Vanalli C, Falvo C,
Crowley D
, Schwarz B, Plowright R, Hudson PJ, et al.
Preprint
2025
Spatio-temporal dynamics of Hendra virus in Pteropus bats in Australia reveals high evolutionary diversity linked with spillover
Munster V, Yinda CK, Eden JS, Prates E, Vlot A, Anzick S, Wang J, …
Crowley DE
, et al.
Peer Community Journal
2024
Reconstructing prevalence dynamics of wildlife pathogens from pooled and individual samples
Borremans B, Falvo CA,
Crowley DE
, Hoegh A, Lloyd-Smith JO, Peel AJ, et al.
Nature Communications
2023
Antiviral responses in a Jamaican fruit bat intestinal organoid model of SARS-CoV-2 infection
Hashimi M, Sebrell TA, Hedges JF, Snyder D, Lyon KN, Byrum SD, …
Crowley DE
, et al.
Preprint — bioRxiv
2023
Periodic shifts in viral load increase risk of spillover from bats
Lunn TJ, Borremans B, Jones DN, Kessler MK, Dale AS, Yinda KC, …
Crowley DE
, et al.
Journal of Biogeography
2021
A hybrid correlative–mechanistic approach for modeling winter distributions of North American bat species
McClure ML, Haase CG, Hranac CR, Hayman DTS, Dickson BG, …
Crowley D
, et al.
Report
2021
Assessing White-nose Syndrome in the Context of Non-Stationary Conditions in an Advancing Continental Epidemic
Olson SH,
Crowley D
, Dickson BG, Dzal YA, Fuller NW, Haase CG, et al.
Ecosphere
2020
Linking surface and subterranean climate: implications for the study of hibernating bats and other cave dwellers
McClure ML,
Crowley D
, Haase CG, McGuire LP, Fuller NW, et al.
Phil. Trans. Royal Society B
2019
Percolation models of pathogen spillover
Washburne AD,
Crowley DE
, Becker DJ, Manlove KR, Childs ML, et al.
Ecological Monographs
2019
Phylofactorization: a graph partitioning algorithm to identify phylogenetic scales of ecological data
Washburne AD, Silverman JD, Morton JT, Becker DJ,
Crowley D
, et al.
Biology Letters
2019
Temporal and spatial limitations in global surveillance for bat filoviruses and henipaviruses
Becker DJ,
Crowley DE
, Washburne AD, Plowright RK.
Ann. NY Academy of Sciences
2018
Changing resource landscapes and spillover of henipaviruses
Kessler MK, Becker DJ, Peel AJ, Justice NV, Lunn T,
Crowley DE
, et al.
PeerJ
2018
Taxonomic patterns in the zoonotic potential of mammalian viruses
Washburne AD,
Crowley DE
, Becker DJ, Olival KJ, Taylor M, Munster VJ, et al.